Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900560.1_cds_XP_016450585.1_45020
CDS Infomation

[gene=LOC107775374] [db_xref=GeneID:107775374] [protein=protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like] [protein_id=XP_016450585.1] [location=complement(join(39702..41573,41843..42745))] [gbkey=CDS]
Sequence

ATGGAAGATGCAAAAGATATGAAGGAAAATTCTCCCCAAGAATCTGCTCCTGAACCTAAA
GTTTCTGTTCTGAGGGAGGATCAATCACATGGTGAAACTCAACCTAGGCAACATATGAAT
GGAACAGCAAATTCTGAAATTCAGGAGACAGCCGTGTATGCTTCTCAACATTTGAAAGAA
TCTTCTGACAGATTTCCAACGGAAGATAGTCAAAATCATCAGCCAGGAAGTTTAGGTTCA
GCCTCTTCCATTAAATCCGCCGGTGCAGGTGACATTTCGAAAACAGGAAGTCTTCAATCA
GCTGTGCCGACAGTTCAGCGGGAAGCCTCACCTCAATTGGCAGAGGATCTGAAATCGTTG
GAGCCTCCAACAGCTCTCTCGGAACCCACTCCATCATCTGTATTAGATACAAAAGCAAGT
GATTCGTTGCAGCAGTCACTGGATGGTGGTTCCAGTGGTAGTCTTTCGAATCAACCAAAT
AATACTGCTCATGGACCTAGAGTAGAGGAAGTTGCTTCACCTTTAGTAACCATGTATTCA
GACTCCCCTCCCATGAAAGAGGAAAACCAAAAAGGATCTTCGGCACACAACTCACTATTC
CAGCAAGATAATTCTCCAAGTAGTACTCACGTTTCTACTGATACACCTGCTTTATCCGCT
CAAGAACACAAACCTGAAAATAATATTCATGTAGAGGCACCTAATACTGGTCAGCCCCTA
GCGAAGGCTTCCAATCTCACAGTTAAGATTCTAGAACCCAGTACCCATTCTAAGCACCCT
GAAAACATTGATATTAACAGAGTCAAAATCGACACAGCTGCACCAATTGAATCTGTGAAG
CAGGCAGTTTCCAAGTTTGGAGGCATCATTGACTGGAAGGCTCATCGAGTACAGTCTGTA
GAGCGAAGGAAAGTTGTCGATCAAGAACTAGCAAAAGTGCAGGAGGAGATCCCACTGTGT
AAGAAACAGTCTCAGGCAGCGGAAGAAGCAAAAATGATGGTATTAAAGGAACTAGATAGT
ACTAAAAGACTGATAGAAGAGTTGAAGCTGAACCTGGAGAGAGCACAAACAGAAGAGCAG
CAAGCAAAACAGGACTCGGAACTTGCCAAGCTCAGGGTAGAAGAGATGGAGCAGGGTATT
GCCGATGAGGCTAGTATTGCAGCCAAGGCGCAGCTTGAAGTTGCTAGAGCCAGGCATGCA
GCTGCTGTTTCGGAGCTAAAAACTGTGAATTTCGAGTTAGAAGATCTTCATAAAGAGTAT
GATTTATTGGTGTCTGAGAGATTTGATGCTGTACAAAAAGCAGAGGAAGCGGTTTCTGCC
TCAAAGAAAGTTGAGAAGGAAGTGGAGGATTTGACTATTGAGGTCATCACTACAAAGGAA
TCTCTGGAGGCTGCACAAGCTGCACACCTGGAGGCAGAGGAACACAGAATTGGAGCAGCG
ATGGCAAGAGAGCAAGATACTCTAAATTGGGAAAAAGAACTAAAGCTGGCAGAAGGGGAG
CTTGAGAAGCTAAACCAGCAAATACTGTCTGCTAAGGACCTCAAAGCAAAATTAGATACT
GCTTCAGCCTTGCTACTAGATCTCAAAGCTGAGTTTGCTGCTTATGTGGAATCAAAGTTG
GAAAAAGAGATGAATGAAGGCGGCAACTTCAAAGGCGAACTGCCTGAGCCAGAGAAACGA
ACTCATGCTGAGATACAAGCAGCGGTGGCCTTGGCTAAACAGGAACTTGATGAAGTGAAA
CGCAATATTGAGAAAGCAACAGTTGAAGTAAATTACTTGAAGGTGGCTGCAACTTCATTG
AAGACAGAACTGGAAAAGGAAAAATCAGAACTAACTGCTATCCAGCAGAGAGAAGGCATG
GCATCAATTACTGTAGCATCTCTTGAAGCTGAGTTGAACAGGACCAAGTCAGAGATTTCC
CTTGTGCAGATGAAGGAGAAAGAAGCAAGAGAAAAGGTGGTGGAGCTTCCCAAGCAATTA
CAAGAGGCCGCCCAAGAGGCTGATCGGGCAAAGTTACTTGCACAAACAGCTCGTGAAGAG
TTGAGAAAGGCAAAGGAAGAAGCAGAGCAAGCAAAGGCAGGAGCAAGTACCATGGAAAGT
AGACTAGTTGCTGCTAAAAAGGAGATAGAGGCTGCAAAAGCTTCTGAAAAGTTGGCACTA
GAAGCCATCAATGCTCTGCAAGAGAGTGAATTAGCTCGAAGCTCTAATGATGAAGATTCC
CCATCTGGAGTAACACTTTCTCTGAAAGAGTATTTTGACCTCAGCAAAATGGCCCATGAG
GCAGAGGAGGAAGCTAATAAGAGGGTGGCTTCTGCTATCACCCAAATAGAGGTAGCGAAG
GAATCAGAGCTCAGAAGTCTAAGCAGGTTGGAGGAAGTTAATTGTGAGATGGCTGATAGA
AAGGAAGCTCTGGAAATCGCAACCCAGAAGGCAGAGAAAGCCAAGGAAGGGAAGTTGGCA
GTAGAGCAAGAGCTGAGGAAATGGAGGGCGGAGCATGGACAAAGACGGAAAGCTGGTGAA
TCTCTTCAACCGATAAACATAACAAGAAGCCCGAGATCGAGTGTTGAGGAGAGTAAAGAA
TCGATAACCTATGAGCGTGCACCAGGGGCTGCTTCACTACATCATAGGTCAAGTCCAAGA
GCATATGAACAAGCAAGTAATACTGAAACTGATACATCTCCAGAAGTGAAGATCCCAAAG
AAAAAGAAGAGGTCCTTCTTCCCAAGGCTCTTCATGTTTCTGGGCAGAAAGAAAGCACAG
GCCAAGACAGCATGA

Peptide Sequence

PEP ID

XP_016450585.1
PEP Infomation

PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like [Nicotiana tabacum]
Sequence

MEDAKDMKENSPQESAPEPKVSVLREDQSHGETQPRQHMNGTANSEIQETAVYASQHLKE
SSDRFPTEDSQNHQPGSLGSASSIKSAGAGDISKTGSLQSAVPTVQREASPQLAEDLKSL
EPPTALSEPTPSSVLDTKASDSLQQSLDGGSSGSLSNQPNNTAHGPRVEEVASPLVTMYS
DSPPMKEENQKGSSAHNSLFQQDNSPSSTHVSTDTPALSAQEHKPENNIHVEAPNTGQPL
AKASNLTVKILEPSTHSKHPENIDINRVKIDTAAPIESVKQAVSKFGGIIDWKAHRVQSV
ERRKVVDQELAKVQEEIPLCKKQSQAAEEAKMMVLKELDSTKRLIEELKLNLERAQTEEQ
QAKQDSELAKLRVEEMEQGIADEASIAAKAQLEVARARHAAAVSELKTVNFELEDLHKEY
DLLVSERFDAVQKAEEAVSASKKVEKEVEDLTIEVITTKESLEAAQAAHLEAEEHRIGAA
MAREQDTLNWEKELKLAEGELEKLNQQILSAKDLKAKLDTASALLLDLKAEFAAYVESKL
EKEMNEGGNFKGELPEPEKRTHAEIQAAVALAKQELDEVKRNIEKATVEVNYLKVAATSL
KTELEKEKSELTAIQQREGMASITVASLEAELNRTKSEISLVQMKEKEAREKVVELPKQL
QEAAQEADRAKLLAQTAREELRKAKEEAEQAKAGASTMESRLVAAKKEIEAAKASEKLAL
EAINALQESELARSSNDEDSPSGVTLSLKEYFDLSKMAHEAEEEANKRVASAITQIEVAK
ESELRSLSRLEEVNCEMADRKEALEIATQKAEKAKEGKLAVEQELRKWRAEHGQRRKAGE
SLQPINITRSPRSSVEESKESITYERAPGAASLHHRSSPRAYEQASNTETDTSPEVKIPK
KKKRSFFPRLFMFLGRKKAQAKTA

Transcript Sequence

Gene sequence data has not been registered.